Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf2Q8BZT2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Gm13148-201ENSMUST00000118892 745 ntBASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf2Q8BZT2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf2Q8BZT2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf2Q8BZT2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sh3rf2Q8BZT2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3rf2Q8BZT2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf2Q8BZT2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3rf2Q8BZT2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3rf2Q8BZT2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Gm6211-202ENSMUST00000167849 925 ntBASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.36■□□□□ 0.69
Sh3rf2Q8BZT2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms