Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snx17Q8BVL3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Snx17Q8BVL3 Gm11643-201ENSMUST00000119578 864 ntBASIC21.33■■□□□ 1.01
Snx17Q8BVL3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Snx17Q8BVL3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.33■■□□□ 1
Snx17Q8BVL3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Snx17Q8BVL3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Snx17Q8BVL3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Gm7860-201ENSMUST00000121190 879 ntBASIC21.32■■□□□ 1
Snx17Q8BVL3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.32■■□□□ 1
Snx17Q8BVL3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snx17Q8BVL3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Gm15565-201ENSMUST00000118890 427 ntBASIC21.31■■□□□ 1
Snx17Q8BVL3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Snx17Q8BVL3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Snx17Q8BVL3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Snx17Q8BVL3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.3■■□□□ 1
Snx17Q8BVL3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snx17Q8BVL3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Snx17Q8BVL3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Snx17Q8BVL3 AA386476-201ENSMUST00000098781 1665 ntBASIC21.3■■□□□ 1
Snx17Q8BVL3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.3■■□□□ 1
Snx17Q8BVL3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Snx17Q8BVL3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
Snx17Q8BVL3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.29■■□□□ 1
Snx17Q8BVL3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.29■■□□□ 1
Snx17Q8BVL3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snx17Q8BVL3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Snx17Q8BVL3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snx17Q8BVL3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snx17Q8BVL3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snx17Q8BVL3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Snx17Q8BVL3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snx17Q8BVL3 Gm10698-201ENSMUST00000182663 604 ntBASIC21.27■■□□□ 1
Snx17Q8BVL3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.27■■□□□ 1
Snx17Q8BVL3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Snx17Q8BVL3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Snx17Q8BVL3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.26■□□□□ 0.99
Snx17Q8BVL3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Gm18666-201ENSMUST00000190039 958 ntBASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snx17Q8BVL3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms