Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc43a1Q8BSM7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc43a1Q8BSM7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc43a1Q8BSM7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc43a1Q8BSM7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc43a1Q8BSM7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc43a1Q8BSM7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gm10653-202ENSMUST00000139570 835 ntBASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.27■□□□□ 0.68
Slc43a1Q8BSM7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slc43a1Q8BSM7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Slc43a1Q8BSM7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Slc43a1Q8BSM7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc43a1Q8BSM7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc43a1Q8BSM7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Gm20760-201ENSMUST00000179197 648 ntBASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc43a1Q8BSM7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms