Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cc2d1bQ8BRN9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cc2d1bQ8BRN9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Cc2d1bQ8BRN9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cc2d1bQ8BRN9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cc2d1bQ8BRN9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Gm43173-201ENSMUST00000202246 593 ntBASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cc2d1bQ8BRN9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Smad6-203ENSMUST00000179458 273 ntBASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.06■□□□□ 0.96
Cc2d1bQ8BRN9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Gm45417-201ENSMUST00000209533 758 ntBASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cc2d1bQ8BRN9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cc2d1bQ8BRN9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.03■□□□□ 0.96
Cc2d1bQ8BRN9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 Gm6139-201ENSMUST00000079261 882 ntBASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cc2d1bQ8BRN9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms