Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Gm42778-201ENSMUST00000199644 553 ntBASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rab11fip4Q8BQP8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rab11fip4Q8BQP8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab11fip4Q8BQP8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab11fip4Q8BQP8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rab11fip4Q8BQP8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.08■□□□□ 0.97
Rab11fip4Q8BQP8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rab11fip4Q8BQP8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rab11fip4Q8BQP8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rab11fip4Q8BQP8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rab11fip4Q8BQP8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Gm10849-201ENSMUST00000100397 618 ntBASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab11fip4Q8BQP8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab11fip4Q8BQP8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab11fip4Q8BQP8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rab11fip4Q8BQP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab11fip4Q8BQP8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms