Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam78bQ8BQN5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam78bQ8BQN5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam78bQ8BQN5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fam78bQ8BQN5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fam78bQ8BQN5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.28■□□□□ 0.04
Fam78bQ8BQN5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Fam78bQ8BQN5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fam78bQ8BQN5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Gm15820-201ENSMUST00000201566 728 ntBASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam78bQ8BQN5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam78bQ8BQN5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam78bQ8BQN5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam78bQ8BQN5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fam78bQ8BQN5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam78bQ8BQN5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms