Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Gm8495-201ENSMUST00000188740 694 ntBASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sfr1Q8BP27 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.35■□□□□ 0.69
Sfr1Q8BP27 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.35■□□□□ 0.69
Sfr1Q8BP27 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Gm9988-201ENSMUST00000069786 435 ntBASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.35■□□□□ 0.69
Sfr1Q8BP27 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sfr1Q8BP27 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sfr1Q8BP27 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sfr1Q8BP27 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.33■□□□□ 0.69
Sfr1Q8BP27 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sfr1Q8BP27 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sfr1Q8BP27 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sfr1Q8BP27 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sfr1Q8BP27 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sfr1Q8BP27 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sfr1Q8BP27 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Gm42778-201ENSMUST00000199644 553 ntBASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sfr1Q8BP27 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.3■□□□□ 0.68
Sfr1Q8BP27 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Sfr1Q8BP27 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms