Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpa1Q8BLA8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.03■□□□□ 0.8
Trpa1Q8BLA8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpa1Q8BLA8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.03■□□□□ 0.8
Trpa1Q8BLA8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.03■□□□□ 0.8
Trpa1Q8BLA8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.02■□□□□ 0.8
Trpa1Q8BLA8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Trpa1Q8BLA8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trpa1Q8BLA8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trpa1Q8BLA8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.02■□□□□ 0.79
Trpa1Q8BLA8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpa1Q8BLA8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Gm18284-201ENSMUST00000172604 624 ntBASIC20■□□□□ 0.79
Trpa1Q8BLA8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trpa1Q8BLA8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpa1Q8BLA8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpa1Q8BLA8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trpa1Q8BLA8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Gm27801-201ENSMUST00000184174 223 ntBASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Gm5874-201ENSMUST00000096101 508 ntBASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpa1Q8BLA8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpa1Q8BLA8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms