Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SpidrQ8BGX7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SpidrQ8BGX7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.45■■□□□ 1.19
SpidrQ8BGX7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
SpidrQ8BGX7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SpidrQ8BGX7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Gm27275-201ENSMUST00000184318 272 ntBASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Gm10812-201ENSMUST00000099864 546 ntBASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SpidrQ8BGX7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SpidrQ8BGX7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpidrQ8BGX7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpidrQ8BGX7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.41■■□□□ 1.18
SpidrQ8BGX7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpidrQ8BGX7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SpidrQ8BGX7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SpidrQ8BGX7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SpidrQ8BGX7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpidrQ8BGX7 Gm12896-201ENSMUST00000118430 226 ntBASIC22.39■■□□□ 1.17
SpidrQ8BGX7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpidrQ8BGX7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SpidrQ8BGX7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SpidrQ8BGX7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SpidrQ8BGX7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SpidrQ8BGX7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SpidrQ8BGX7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms