Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Samm50Q8BGH2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Samm50Q8BGH2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Samm50Q8BGH2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.33■■□□□ 1.17
Samm50Q8BGH2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Samm50Q8BGH2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Samm50Q8BGH2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
Samm50Q8BGH2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Samm50Q8BGH2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.3■■□□□ 1.16
Samm50Q8BGH2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Samm50Q8BGH2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Samm50Q8BGH2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Gm26833-201ENSMUST00000180899 440 ntBASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.28■■□□□ 1.16
Samm50Q8BGH2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.27■■□□□ 1.16
Samm50Q8BGH2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Samm50Q8BGH2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Samm50Q8BGH2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Samm50Q8BGH2 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms