Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.8■□□□□ 0.6
Ubp1Q811S7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.8■□□□□ 0.6
Ubp1Q811S7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubp1Q811S7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.79■□□□□ 0.6
Ubp1Q811S7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubp1Q811S7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.78■□□□□ 0.6
Ubp1Q811S7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubp1Q811S7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.78■□□□□ 0.6
Ubp1Q811S7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubp1Q811S7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
Ubp1Q811S7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ubp1Q811S7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubp1Q811S7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.77■□□□□ 0.6
Ubp1Q811S7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ubp1Q811S7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.77■□□□□ 0.6
Ubp1Q811S7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubp1Q811S7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ubp1Q811S7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.76■□□□□ 0.59
Ubp1Q811S7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.76■□□□□ 0.59
Ubp1Q811S7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.76■□□□□ 0.59
Ubp1Q811S7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.75■□□□□ 0.59
Ubp1Q811S7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubp1Q811S7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.74■□□□□ 0.59
Ubp1Q811S7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.74■□□□□ 0.59
Ubp1Q811S7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.74■□□□□ 0.59
Ubp1Q811S7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.74■□□□□ 0.59
Ubp1Q811S7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.74■□□□□ 0.59
Ubp1Q811S7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubp1Q811S7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.73■□□□□ 0.59
Ubp1Q811S7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubp1Q811S7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms