Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Prpf40bQ80W14 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Prpf40bQ80W14 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Gm20049-201ENSMUST00000219950 730 ntBASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Prpf40bQ80W14 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Prpf40bQ80W14 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Prpf40bQ80W14 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Prpf40bQ80W14 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.02■■□□□ 1.12
Prpf40bQ80W14 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.02■■□□□ 1.12
Prpf40bQ80W14 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Prpf40bQ80W14 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.01■■□□□ 1.11
Prpf40bQ80W14 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.01■■□□□ 1.11
Prpf40bQ80W14 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Prpf40bQ80W14 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22■■□□□ 1.11
Prpf40bQ80W14 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22■■□□□ 1.11
Prpf40bQ80W14 Gm6365-201ENSMUST00000054711 744 ntBASIC22■■□□□ 1.11
Prpf40bQ80W14 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Prpf40bQ80W14 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Prpf40bQ80W14 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Iqck-206ENSMUST00000208658 2891 ntBASIC21.99■■□□□ 1.11
Prpf40bQ80W14 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Gm7290-201ENSMUST00000104990 617 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Gm12918-201ENSMUST00000120234 636 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Gm15710-201ENSMUST00000121821 636 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Gm5075-201ENSMUST00000196916 622 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms