Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ush1gQ80T11 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ush1gQ80T11 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Ush1gQ80T11 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ush1gQ80T11 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ush1gQ80T11 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ush1gQ80T11 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ush1gQ80T11 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ush1gQ80T11 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.94■□□□□ 0.94
Ush1gQ80T11 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ush1gQ80T11 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Gm5408-201ENSMUST00000197998 747 ntBASIC20.92■□□□□ 0.94
Ush1gQ80T11 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ush1gQ80T11 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.92■□□□□ 0.94
Ush1gQ80T11 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.92■□□□□ 0.94
Ush1gQ80T11 Gm13146-201ENSMUST00000118508 780 ntBASIC20.91■□□□□ 0.94
Ush1gQ80T11 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ush1gQ80T11 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ush1gQ80T11 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.9■□□□□ 0.94
Ush1gQ80T11 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.9■□□□□ 0.94
Ush1gQ80T11 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ush1gQ80T11 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ush1gQ80T11 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ush1gQ80T11 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ush1gQ80T11 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Gm6365-201ENSMUST00000054711 744 ntBASIC20.88■□□□□ 0.93
Ush1gQ80T11 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ush1gQ80T11 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ush1gQ80T11 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.87■□□□□ 0.93
Ush1gQ80T11 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms