Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lca5Q80ST9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lca5Q80ST9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Lca5Q80ST9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lca5Q80ST9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.87■■□□□ 1.09
Lca5Q80ST9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lca5Q80ST9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.87■■□□□ 1.09
Lca5Q80ST9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.86■■□□□ 1.09
Lca5Q80ST9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lca5Q80ST9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lca5Q80ST9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Gm12933-201ENSMUST00000120203 872 ntBASIC21.84■■□□□ 1.09
Lca5Q80ST9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Gm6420-201ENSMUST00000193885 723 ntBASIC21.84■■□□□ 1.09
Lca5Q80ST9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lca5Q80ST9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lca5Q80ST9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lca5Q80ST9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lca5Q80ST9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lca5Q80ST9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Lca5Q80ST9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Lca5Q80ST9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Lca5Q80ST9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.83■■□□□ 1.08
Lca5Q80ST9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lca5Q80ST9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lca5Q80ST9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lca5Q80ST9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.81■■□□□ 1.08
Lca5Q80ST9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lca5Q80ST9 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.81■■□□□ 1.08
Lca5Q80ST9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lca5Q80ST9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Golph3-202ENSMUST00000226517 2359 ntBASIC21.8■■□□□ 1.08
Lca5Q80ST9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.8■■□□□ 1.08
Lca5Q80ST9 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms