Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Gm9870-201ENSMUST00000063874 645 ntBASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Gm5921-201ENSMUST00000075898 882 ntBASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rfx4Q7TNK1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx4Q7TNK1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Etf1-202ENSMUST00000180351 108 ntBASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx4Q7TNK1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx4Q7TNK1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfx4Q7TNK1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
Rfx4Q7TNK1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx4Q7TNK1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms