Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rnf139Q7TMV1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rnf139Q7TMV1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf139Q7TMV1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.46■□□□□ 0.87
Rnf139Q7TMV1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf139Q7TMV1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf139Q7TMV1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf139Q7TMV1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Gm18284-201ENSMUST00000172604 624 ntBASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms