Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.18■□□□□ 0.18
Rif1Q6PR54 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Gm43183-201ENSMUST00000200632 547 ntBASIC16.17■□□□□ 0.18
Rif1Q6PR54 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.17■□□□□ 0.18
Rif1Q6PR54 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rif1Q6PR54 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rif1Q6PR54 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.16■□□□□ 0.18
Rif1Q6PR54 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.16■□□□□ 0.18
Rif1Q6PR54 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rif1Q6PR54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Gm37935-201ENSMUST00000192012 982 ntBASIC16.15■□□□□ 0.18
Rif1Q6PR54 Odf3b-204ENSMUST00000227834 930 ntBASIC16.15■□□□□ 0.18
Rif1Q6PR54 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rif1Q6PR54 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Gm2399-201ENSMUST00000104944 225 ntBASIC16.14■□□□□ 0.17
Rif1Q6PR54 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Gm7153-201ENSMUST00000117092 455 ntBASIC16.14■□□□□ 0.17
Rif1Q6PR54 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.14■□□□□ 0.17
Rif1Q6PR54 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.14■□□□□ 0.17
Rif1Q6PR54 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rif1Q6PR54 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rif1Q6PR54 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.13■□□□□ 0.17
Rif1Q6PR54 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rif1Q6PR54 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms