Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Gm13148-201ENSMUST00000118892 745 ntBASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prrt3Q6PE13 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prrt3Q6PE13 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Gm6365-201ENSMUST00000054711 744 ntBASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prrt3Q6PE13 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.08■□□□□ 0.81
Prrt3Q6PE13 Gm12441-201ENSMUST00000121806 588 ntBASIC20.08■□□□□ 0.81
Prrt3Q6PE13 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prrt3Q6PE13 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Prrt3Q6PE13 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Gm7860-201ENSMUST00000121190 879 ntBASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Gm4968-201ENSMUST00000071458 858 ntBASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prrt3Q6PE13 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prrt3Q6PE13 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prrt3Q6PE13 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Gm10653-202ENSMUST00000139570 835 ntBASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prrt3Q6PE13 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prrt3Q6PE13 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prrt3Q6PE13 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms