Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Golph3-202ENSMUST00000226517 2359 ntBASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim37Q6PCX9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim37Q6PCX9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim37Q6PCX9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Gm5408-201ENSMUST00000197998 747 ntBASIC21.19■□□□□ 0.98
Trim37Q6PCX9 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim37Q6PCX9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim37Q6PCX9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim37Q6PCX9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim37Q6PCX9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim37Q6PCX9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim37Q6PCX9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trim37Q6PCX9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim37Q6PCX9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.15■□□□□ 0.98
Trim37Q6PCX9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim37Q6PCX9 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.14■□□□□ 0.98
Trim37Q6PCX9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim37Q6PCX9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Gm20049-201ENSMUST00000219950 730 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms