Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd3Q6P9Z1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd3Q6P9Z1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd3Q6P9Z1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Smarcd3Q6P9Z1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcd3Q6P9Z1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcd3Q6P9Z1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd3Q6P9Z1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd3Q6P9Z1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd3Q6P9Z1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms