Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgb4Q6P8W9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgb4Q6P8W9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgb4Q6P8W9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgb4Q6P8W9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Gm12933-201ENSMUST00000120203 872 ntBASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgb4Q6P8W9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Hmgb4Q6P8W9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgb4Q6P8W9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmgb4Q6P8W9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hmgb4Q6P8W9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgb4Q6P8W9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgb4Q6P8W9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgb4Q6P8W9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms