Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc4Q6P2L7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc4Q6P2L7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Casc4Q6P2L7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Casc4Q6P2L7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.27■□□□□ 0.68
Casc4Q6P2L7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Casc4Q6P2L7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Casc4Q6P2L7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Casc4Q6P2L7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Casc4Q6P2L7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Gm9988-201ENSMUST00000069786 435 ntBASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casc4Q6P2L7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casc4Q6P2L7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms