Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cep290Q6A078 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cep290Q6A078 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cep290Q6A078 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.74■□□□□ 0.75
Cep290Q6A078 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cep290Q6A078 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cep290Q6A078 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.74■□□□□ 0.75
Cep290Q6A078 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.74■□□□□ 0.75
Cep290Q6A078 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cep290Q6A078 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cep290Q6A078 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Cep290Q6A078 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.74■□□□□ 0.75
Cep290Q6A078 Ank2-226ENSMUST00000189368 339 ntBASIC19.74■□□□□ 0.75
Cep290Q6A078 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cep290Q6A078 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cep290Q6A078 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cep290Q6A078 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.73■□□□□ 0.75
Cep290Q6A078 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cep290Q6A078 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cep290Q6A078 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.73■□□□□ 0.75
Cep290Q6A078 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cep290Q6A078 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.72■□□□□ 0.75
Cep290Q6A078 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cep290Q6A078 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.71■□□□□ 0.75
Cep290Q6A078 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Cep290Q6A078 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cep290Q6A078 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cep290Q6A078 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.7■□□□□ 0.74
Cep290Q6A078 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.7■□□□□ 0.74
Cep290Q6A078 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.7■□□□□ 0.74
Cep290Q6A078 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.7■□□□□ 0.74
Cep290Q6A078 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.7■□□□□ 0.74
Cep290Q6A078 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cep290Q6A078 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.69■□□□□ 0.74
Cep290Q6A078 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cep290Q6A078 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.68■□□□□ 0.74
Cep290Q6A078 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cep290Q6A078 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cep290Q6A078 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.68■□□□□ 0.74
Cep290Q6A078 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cep290Q6A078 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.67■□□□□ 0.74
Cep290Q6A078 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cep290Q6A078 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.66■□□□□ 0.74
Cep290Q6A078 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Cep290Q6A078 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cep290Q6A078 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cep290Q6A078 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cep290Q6A078 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms