Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
AtmQ62388 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AtmQ62388 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
AtmQ62388 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AtmQ62388 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
AtmQ62388 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AtmQ62388 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.33■□□□□ 0.53
AtmQ62388 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
AtmQ62388 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
AtmQ62388 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AtmQ62388 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
AtmQ62388 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AtmQ62388 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AtmQ62388 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.33■□□□□ 0.52
AtmQ62388 Gm43799-201ENSMUST00000201845 579 ntBASIC18.33■□□□□ 0.52
AtmQ62388 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
AtmQ62388 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AtmQ62388 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 Gm2559-201ENSMUST00000201323 363 ntBASIC18.32■□□□□ 0.52
AtmQ62388 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AtmQ62388 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Gm6659-201ENSMUST00000174752 547 ntBASIC18.31■□□□□ 0.52
AtmQ62388 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AtmQ62388 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.31■□□□□ 0.52
AtmQ62388 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.31■□□□□ 0.52
AtmQ62388 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.31■□□□□ 0.52
AtmQ62388 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AtmQ62388 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AtmQ62388 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AtmQ62388 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.3■□□□□ 0.52
AtmQ62388 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AtmQ62388 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AtmQ62388 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.3■□□□□ 0.52
AtmQ62388 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.3■□□□□ 0.52
AtmQ62388 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
AtmQ62388 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.29■□□□□ 0.52
AtmQ62388 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.29■□□□□ 0.52
AtmQ62388 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.29■□□□□ 0.52
AtmQ62388 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.29■□□□□ 0.52
AtmQ62388 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AtmQ62388 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AtmQ62388 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.28■□□□□ 0.52
AtmQ62388 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AtmQ62388 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AtmQ62388 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AtmQ62388 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
AtmQ62388 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AtmQ62388 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.28■□□□□ 0.52
AtmQ62388 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.28■□□□□ 0.52
AtmQ62388 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
AtmQ62388 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AtmQ62388 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
AtmQ62388 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AtmQ62388 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AtmQ62388 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AtmQ62388 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AtmQ62388 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AtmQ62388 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
AtmQ62388 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AtmQ62388 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AtmQ62388 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
AtmQ62388 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AtmQ62388 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AtmQ62388 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AtmQ62388 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
AtmQ62388 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AtmQ62388 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AtmQ62388 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms