Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six3Q62233 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six3Q62233 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Six3Q62233 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.67■□□□□ 0.58
Six3Q62233 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Six3Q62233 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Six3Q62233 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six3Q62233 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six3Q62233 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six3Q62233 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Six3Q62233 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.66■□□□□ 0.58
Six3Q62233 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.66■□□□□ 0.58
Six3Q62233 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.66■□□□□ 0.58
Six3Q62233 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Gm13241-201ENSMUST00000094493 780 ntBASIC18.66■□□□□ 0.58
Six3Q62233 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Six3Q62233 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Six3Q62233 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six3Q62233 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Six3Q62233 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Six3Q62233 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Six3Q62233 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.65■□□□□ 0.58
Six3Q62233 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Six3Q62233 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Six3Q62233 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Six3Q62233 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six3Q62233 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.64■□□□□ 0.58
Six3Q62233 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six3Q62233 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six3Q62233 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six3Q62233 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six3Q62233 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six3Q62233 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Six3Q62233 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six3Q62233 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Six3Q62233 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Six3Q62233 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.63■□□□□ 0.57
Six3Q62233 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.63■□□□□ 0.57
Six3Q62233 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.63■□□□□ 0.57
Six3Q62233 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Six3Q62233 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Six3Q62233 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six3Q62233 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Six3Q62233 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six3Q62233 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Six3Q62233 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.61■□□□□ 0.57
Six3Q62233 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six3Q62233 BC021767-201ENSMUST00000126387 1716 ntBASIC18.6■□□□□ 0.57
Six3Q62233 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six3Q62233 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms