Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Six2Q62232 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Six2Q62232 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Six2Q62232 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Six2Q62232 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Six2Q62232 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six2Q62232 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.46■□□□□ 0.87
Six2Q62232 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six2Q62232 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Six2Q62232 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Six2Q62232 Gm26833-201ENSMUST00000180899 440 ntBASIC20.45■□□□□ 0.86
Six2Q62232 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Six2Q62232 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six2Q62232 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Six2Q62232 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six2Q62232 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Six2Q62232 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Six2Q62232 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.44■□□□□ 0.86
Six2Q62232 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.44■□□□□ 0.86
Six2Q62232 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Six2Q62232 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six2Q62232 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Six2Q62232 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Six2Q62232 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six2Q62232 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six2Q62232 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six2Q62232 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six2Q62232 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six2Q62232 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Six2Q62232 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Six2Q62232 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Gm7860-201ENSMUST00000121190 879 ntBASIC20.42■□□□□ 0.86
Six2Q62232 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six2Q62232 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.41■□□□□ 0.86
Six2Q62232 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Six2Q62232 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.41■□□□□ 0.86
Six2Q62232 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Six2Q62232 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Six2Q62232 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six2Q62232 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Six2Q62232 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.4■□□□□ 0.86
Six2Q62232 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Six2Q62232 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Six2Q62232 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.4■□□□□ 0.86
Six2Q62232 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Six2Q62232 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Six2Q62232 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.4■□□□□ 0.86
Six2Q62232 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Six2Q62232 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six2Q62232 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Six2Q62232 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Six2Q62232 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Six2Q62232 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Six2Q62232 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Six2Q62232 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Six2Q62232 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.39■□□□□ 0.85
Six2Q62232 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.39■□□□□ 0.85
Six2Q62232 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six2Q62232 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms