Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.68■□□□□ 0.74
Six1Q62231 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Six1Q62231 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Six1Q62231 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.68■□□□□ 0.74
Six1Q62231 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.68■□□□□ 0.74
Six1Q62231 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six1Q62231 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Six1Q62231 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six1Q62231 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six1Q62231 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six1Q62231 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six1Q62231 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.67■□□□□ 0.74
Six1Q62231 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six1Q62231 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six1Q62231 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six1Q62231 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Six1Q62231 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six1Q62231 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Six1Q62231 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Six1Q62231 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.66■□□□□ 0.74
Six1Q62231 Gm43137-201ENSMUST00000198052 594 ntBASIC19.66■□□□□ 0.74
Six1Q62231 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six1Q62231 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six1Q62231 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.66■□□□□ 0.74
Six1Q62231 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Six1Q62231 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Six1Q62231 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six1Q62231 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Six1Q62231 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Six1Q62231 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Six1Q62231 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.65■□□□□ 0.74
Six1Q62231 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Gm9847-201ENSMUST00000052528 599 ntBASIC19.65■□□□□ 0.74
Six1Q62231 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Six1Q62231 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.65■□□□□ 0.74
Six1Q62231 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six1Q62231 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Six1Q62231 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.64■□□□□ 0.73
Six1Q62231 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.64■□□□□ 0.73
Six1Q62231 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.64■□□□□ 0.73
Six1Q62231 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six1Q62231 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Six1Q62231 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.63■□□□□ 0.73
Six1Q62231 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.63■□□□□ 0.73
Six1Q62231 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Six1Q62231 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.63■□□□□ 0.73
Six1Q62231 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six1Q62231 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Six1Q62231 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.62■□□□□ 0.73
Six1Q62231 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six1Q62231 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.62■□□□□ 0.73
Six1Q62231 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.61■□□□□ 0.73
Six1Q62231 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.61■□□□□ 0.73
Six1Q62231 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.61■□□□□ 0.73
Six1Q62231 Gm21956-201ENSMUST00000179946 522 ntBASIC19.61■□□□□ 0.73
Six1Q62231 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.61■□□□□ 0.73
Six1Q62231 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.61■□□□□ 0.73
Six1Q62231 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms