Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.97■□□□□ 0.79
Smarcd1Q61466 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smarcd1Q61466 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.96■□□□□ 0.79
Smarcd1Q61466 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcd1Q61466 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Gm13534-201ENSMUST00000121169 513 ntBASIC19.95■□□□□ 0.78
Smarcd1Q61466 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.95■□□□□ 0.78
Smarcd1Q61466 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcd1Q61466 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcd1Q61466 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarcd1Q61466 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.93■□□□□ 0.78
Smarcd1Q61466 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd1Q61466 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smarcd1Q61466 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcd1Q61466 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcd1Q61466 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcd1Q61466 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcd1Q61466 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarcd1Q61466 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms