Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.23■□□□□ 0.19
Hcfc1Q61191 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcfc1Q61191 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.22■□□□□ 0.19
Hcfc1Q61191 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hcfc1Q61191 Gm10698-201ENSMUST00000182663 604 ntBASIC16.22■□□□□ 0.19
Hcfc1Q61191 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.22■□□□□ 0.19
Hcfc1Q61191 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hcfc1Q61191 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.22■□□□□ 0.19
Hcfc1Q61191 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcfc1Q61191 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hcfc1Q61191 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hcfc1Q61191 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hcfc1Q61191 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hcfc1Q61191 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hcfc1Q61191 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hcfc1Q61191 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hcfc1Q61191 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hcfc1Q61191 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hcfc1Q61191 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Mir1199-201ENSMUST00000117015 119 ntBASIC16.19■□□□□ 0.18
Hcfc1Q61191 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Gm37055-201ENSMUST00000191866 133 ntBASIC16.19■□□□□ 0.18
Hcfc1Q61191 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hcfc1Q61191 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.19■□□□□ 0.18
Hcfc1Q61191 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hcfc1Q61191 Gm15565-201ENSMUST00000118890 427 ntBASIC16.18■□□□□ 0.18
Hcfc1Q61191 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.18■□□□□ 0.18
Hcfc1Q61191 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Gm11249-201ENSMUST00000117071 859 ntBASIC16.17■□□□□ 0.18
Hcfc1Q61191 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hcfc1Q61191 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hcfc1Q61191 Gm2399-201ENSMUST00000104944 225 ntBASIC16.16■□□□□ 0.18
Hcfc1Q61191 Gm13158-201ENSMUST00000122007 736 ntBASIC16.16■□□□□ 0.18
Hcfc1Q61191 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcfc1Q61191 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hcfc1Q61191 Gm44549-201ENSMUST00000208351 577 ntBASIC16.16■□□□□ 0.18
Hcfc1Q61191 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hcfc1Q61191 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hcfc1Q61191 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms