Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
NfkbibQ60778 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.11■■□□□ 1.29
NfkbibQ60778 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
NfkbibQ60778 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NfkbibQ60778 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NfkbibQ60778 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NfkbibQ60778 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.1■■□□□ 1.29
NfkbibQ60778 Gm6420-201ENSMUST00000193885 723 ntBASIC23.1■■□□□ 1.29
NfkbibQ60778 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NfkbibQ60778 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.09■■□□□ 1.29
NfkbibQ60778 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NfkbibQ60778 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
NfkbibQ60778 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NfkbibQ60778 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NfkbibQ60778 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
NfkbibQ60778 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NfkbibQ60778 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
NfkbibQ60778 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NfkbibQ60778 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NfkbibQ60778 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NfkbibQ60778 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NfkbibQ60778 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NfkbibQ60778 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NfkbibQ60778 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NfkbibQ60778 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
NfkbibQ60778 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NfkbibQ60778 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
NfkbibQ60778 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NfkbibQ60778 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NfkbibQ60778 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NfkbibQ60778 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NfkbibQ60778 Gm12933-201ENSMUST00000120203 872 ntBASIC23.06■■□□□ 1.28
NfkbibQ60778 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.06■■□□□ 1.28
NfkbibQ60778 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
NfkbibQ60778 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NfkbibQ60778 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
NfkbibQ60778 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NfkbibQ60778 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NfkbibQ60778 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NfkbibQ60778 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Nespas-201ENSMUST00000143738 1083 ntBASIC23.05■■□□□ 1.28
NfkbibQ60778 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NfkbibQ60778 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NfkbibQ60778 Golph3-202ENSMUST00000226517 2359 ntBASIC23.04■■□□□ 1.28
NfkbibQ60778 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NfkbibQ60778 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.04■■□□□ 1.28
NfkbibQ60778 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NfkbibQ60778 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NfkbibQ60778 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NfkbibQ60778 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.04■■□□□ 1.28
NfkbibQ60778 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.03■■□□□ 1.28
NfkbibQ60778 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Gm29257-201ENSMUST00000186115 639 ntBASIC23.03■■□□□ 1.28
NfkbibQ60778 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.03■■□□□ 1.28
NfkbibQ60778 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NfkbibQ60778 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NfkbibQ60778 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NfkbibQ60778 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NfkbibQ60778 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NfkbibQ60778 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NfkbibQ60778 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
NfkbibQ60778 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NfkbibQ60778 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms