Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Ubr3Q5U430 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.65■■□□□ 1.38
Ubr3Q5U430 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Ubr3Q5U430 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.64■■□□□ 1.38
Ubr3Q5U430 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ubr3Q5U430 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.64■■□□□ 1.38
Ubr3Q5U430 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr3Q5U430 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.63■■□□□ 1.37
Ubr3Q5U430 Gm13158-201ENSMUST00000122007 736 ntBASIC23.63■■□□□ 1.37
Ubr3Q5U430 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr3Q5U430 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.62■■□□□ 1.37
Ubr3Q5U430 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ubr3Q5U430 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.61■■□□□ 1.37
Ubr3Q5U430 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.61■■□□□ 1.37
Ubr3Q5U430 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr3Q5U430 Gm15378-201ENSMUST00000121894 207 ntBASIC23.6■■□□□ 1.37
Ubr3Q5U430 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr3Q5U430 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.59■■□□□ 1.37
Ubr3Q5U430 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.59■■□□□ 1.37
Ubr3Q5U430 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr3Q5U430 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.58■■□□□ 1.37
Ubr3Q5U430 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr3Q5U430 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.58■■□□□ 1.37
Ubr3Q5U430 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.58■■□□□ 1.37
Ubr3Q5U430 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr3Q5U430 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr3Q5U430 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr3Q5U430 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ubr3Q5U430 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ubr3Q5U430 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.58■■□□□ 1.36
Ubr3Q5U430 Gm43799-201ENSMUST00000201845 579 ntBASIC23.58■■□□□ 1.36
Ubr3Q5U430 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ubr3Q5U430 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Ubr3Q5U430 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr3Q5U430 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.57■■□□□ 1.36
Ubr3Q5U430 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Ubr3Q5U430 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr3Q5U430 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr3Q5U430 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr3Q5U430 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr3Q5U430 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr3Q5U430 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Ubr3Q5U430 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr3Q5U430 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr3Q5U430 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr3Q5U430 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Ubr3Q5U430 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.55■■□□□ 1.36
Ubr3Q5U430 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.55■■□□□ 1.36
Ubr3Q5U430 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr3Q5U430 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms