Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 BC021767-201ENSMUST00000126387 1716 ntBASIC18.9■□□□□ 0.62
Scn2bQ56A07 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.9■□□□□ 0.62
Scn2bQ56A07 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.89■□□□□ 0.61
Scn2bQ56A07 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.89■□□□□ 0.61
Scn2bQ56A07 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2bQ56A07 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.88■□□□□ 0.61
Scn2bQ56A07 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.88■□□□□ 0.61
Scn2bQ56A07 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2bQ56A07 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2bQ56A07 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Gm45417-201ENSMUST00000209533 758 ntBASIC18.85■□□□□ 0.61
Scn2bQ56A07 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.85■□□□□ 0.61
Scn2bQ56A07 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2bQ56A07 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn2bQ56A07 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scn2bQ56A07 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2bQ56A07 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn2bQ56A07 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scn2bQ56A07 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn2bQ56A07 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Scn2bQ56A07 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2bQ56A07 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms