Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.74■□□□□ 0.59
Tmed1Q3V009 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.74■□□□□ 0.59
Tmed1Q3V009 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Gm7417-201ENSMUST00000192950 473 ntBASIC18.74■□□□□ 0.59
Tmed1Q3V009 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.74■□□□□ 0.59
Tmed1Q3V009 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Tmed1Q3V009 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Gm5812-201ENSMUST00000061073 957 ntBASIC18.73■□□□□ 0.59
Tmed1Q3V009 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmed1Q3V009 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Gm15820-201ENSMUST00000201566 728 ntBASIC18.72■□□□□ 0.59
Tmed1Q3V009 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmed1Q3V009 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tmed1Q3V009 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.7■□□□□ 0.58
Tmed1Q3V009 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tmed1Q3V009 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmed1Q3V009 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmed1Q3V009 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Grk6-206ENSMUST00000224995 2971 ntBASIC18.67■□□□□ 0.58
Tmed1Q3V009 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
Tmed1Q3V009 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmed1Q3V009 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms