Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Gm10602-201ENSMUST00000098239 609 ntBASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Rnf223Q3UV31 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.61■□□□□ 0.57
Rnf223Q3UV31 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf223Q3UV31 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf223Q3UV31 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf223Q3UV31 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf223Q3UV31 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf223Q3UV31 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf223Q3UV31 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf223Q3UV31 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf223Q3UV31 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf223Q3UV31 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf223Q3UV31 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf223Q3UV31 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Mir5133-201ENSMUST00000174955 77 ntBASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Gm6365-201ENSMUST00000054711 744 ntBASIC18.55■□□□□ 0.56
Rnf223Q3UV31 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms