Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc61Q3UJV1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc61Q3UJV1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc61Q3UJV1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc61Q3UJV1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc61Q3UJV1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc61Q3UJV1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc61Q3UJV1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc61Q3UJV1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc61Q3UJV1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc61Q3UJV1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.83■□□□□ 0.77
Ccdc61Q3UJV1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc61Q3UJV1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.83■□□□□ 0.76
Ccdc61Q3UJV1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc61Q3UJV1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc61Q3UJV1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc61Q3UJV1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc61Q3UJV1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Gm6420-201ENSMUST00000193885 723 ntBASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc61Q3UJV1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc61Q3UJV1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm27011-201ENSMUST00000182352 972 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc61Q3UJV1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc61Q3UJV1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc61Q3UJV1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms