Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.85■□□□□ 0.45
Tnrc6aQ3UHK8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnrc6aQ3UHK8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnrc6aQ3UHK8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Gm22240-201ENSMUST00000175225 82 ntBASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Gm8520-201ENSMUST00000186517 868 ntBASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.84■□□□□ 0.45
Tnrc6aQ3UHK8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Tnrc6aQ3UHK8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnrc6aQ3UHK8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.83■□□□□ 0.45
Tnrc6aQ3UHK8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnrc6aQ3UHK8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnrc6aQ3UHK8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnrc6aQ3UHK8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnrc6aQ3UHK8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnrc6aQ3UHK8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnrc6aQ3UHK8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnrc6aQ3UHK8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms