Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cln6Q3U466 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Cln6Q3U466 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln6Q3U466 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cln6Q3U466 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.24■□□□□ 0.19
Cln6Q3U466 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Cln6Q3U466 Gm5812-201ENSMUST00000061073 957 ntBASIC16.24■□□□□ 0.19
Cln6Q3U466 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln6Q3U466 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cln6Q3U466 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Cln6Q3U466 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cln6Q3U466 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cln6Q3U466 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cln6Q3U466 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cln6Q3U466 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.22■□□□□ 0.19
Cln6Q3U466 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cln6Q3U466 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cln6Q3U466 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.21■□□□□ 0.19
Cln6Q3U466 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cln6Q3U466 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cln6Q3U466 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cln6Q3U466 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cln6Q3U466 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Cln6Q3U466 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cln6Q3U466 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cln6Q3U466 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.2■□□□□ 0.18
Cln6Q3U466 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.2■□□□□ 0.18
Cln6Q3U466 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cln6Q3U466 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cln6Q3U466 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 AA386476-201ENSMUST00000098781 1665 ntBASIC16.2■□□□□ 0.18
Cln6Q3U466 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cln6Q3U466 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cln6Q3U466 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cln6Q3U466 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cln6Q3U466 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cln6Q3U466 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms