Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tff1Q08423 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.82■□□□□ 0.12
Tff1Q08423 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.82■□□□□ 0.12
Tff1Q08423 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tff1Q08423 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tff1Q08423 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.81■□□□□ 0.12
Tff1Q08423 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tff1Q08423 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tff1Q08423 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Tff1Q08423 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.8■□□□□ 0.12
Tff1Q08423 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.8■□□□□ 0.12
Tff1Q08423 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Tff1Q08423 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.8■□□□□ 0.12
Tff1Q08423 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tff1Q08423 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tff1Q08423 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tff1Q08423 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tff1Q08423 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 Gm43137-201ENSMUST00000198052 594 ntBASIC15.79■□□□□ 0.12
Tff1Q08423 Gm43017-201ENSMUST00000198296 752 ntBASIC15.79■□□□□ 0.12
Tff1Q08423 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tff1Q08423 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.78■□□□□ 0.12
Tff1Q08423 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Tff1Q08423 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tff1Q08423 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.78■□□□□ 0.12
Tff1Q08423 AA386476-201ENSMUST00000098781 1665 ntBASIC15.78■□□□□ 0.12
Tff1Q08423 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tff1Q08423 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tff1Q08423 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tff1Q08423 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.77■□□□□ 0.12
Tff1Q08423 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.77■□□□□ 0.12
Tff1Q08423 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Tff1Q08423 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Tff1Q08423 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Tff1Q08423 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
Tff1Q08423 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tff1Q08423 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tff1Q08423 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tff1Q08423 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tff1Q08423 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tff1Q08423 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.77■□□□□ 0.11
Tff1Q08423 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tff1Q08423 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.76■□□□□ 0.11
Tff1Q08423 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tff1Q08423 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.76■□□□□ 0.11
Tff1Q08423 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.76■□□□□ 0.11
Tff1Q08423 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tff1Q08423 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Tff1Q08423 Mir7075-201ENSMUST00000184187 82 ntBASIC15.76■□□□□ 0.11
Tff1Q08423 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms