Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm8520-201ENSMUST00000186517 868 ntBASIC19.33■□□□□ 0.68
Ebf1Q07802 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf1Q07802 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf1Q07802 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ebf1Q07802 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Gm13148-201ENSMUST00000118892 745 ntBASIC19.32■□□□□ 0.68
Ebf1Q07802 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ebf1Q07802 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.32■□□□□ 0.68
Ebf1Q07802 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ebf1Q07802 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
Ebf1Q07802 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.31■□□□□ 0.68
Ebf1Q07802 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.31■□□□□ 0.68
Ebf1Q07802 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.31■□□□□ 0.68
Ebf1Q07802 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
Ebf1Q07802 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ebf1Q07802 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ebf1Q07802 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.3■□□□□ 0.68
Ebf1Q07802 Gm6365-201ENSMUST00000054711 744 ntBASIC19.3■□□□□ 0.68
Ebf1Q07802 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ebf1Q07802 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.29■□□□□ 0.68
Ebf1Q07802 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ebf1Q07802 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.28■□□□□ 0.68
Ebf1Q07802 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ebf1Q07802 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.27■□□□□ 0.68
Ebf1Q07802 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ebf1Q07802 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.27■□□□□ 0.68
Ebf1Q07802 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.27■□□□□ 0.68
Ebf1Q07802 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ebf1Q07802 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ebf1Q07802 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.26■□□□□ 0.67
Ebf1Q07802 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.26■□□□□ 0.67
Ebf1Q07802 Gm5408-201ENSMUST00000197998 747 ntBASIC19.26■□□□□ 0.67
Ebf1Q07802 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.26■□□□□ 0.67
Ebf1Q07802 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ebf1Q07802 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ebf1Q07802 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ebf1Q07802 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ebf1Q07802 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms