Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Nkx3-2P97503 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkx3-2P97503 AA386476-201ENSMUST00000098781 1665 ntBASIC17.99■□□□□ 0.47
Nkx3-2P97503 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.98■□□□□ 0.47
Nkx3-2P97503 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkx3-2P97503 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Gm12933-201ENSMUST00000120203 872 ntBASIC17.97■□□□□ 0.47
Nkx3-2P97503 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.97■□□□□ 0.47
Nkx3-2P97503 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx3-2P97503 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx3-2P97503 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.95■□□□□ 0.46
Nkx3-2P97503 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Gm13146-201ENSMUST00000118508 780 ntBASIC17.95■□□□□ 0.46
Nkx3-2P97503 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.95■□□□□ 0.46
Nkx3-2P97503 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx3-2P97503 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nkx3-2P97503 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nkx3-2P97503 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Gm29257-201ENSMUST00000186115 639 ntBASIC17.93■□□□□ 0.46
Nkx3-2P97503 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx3-2P97503 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.92■□□□□ 0.46
Nkx3-2P97503 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx3-2P97503 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms