Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.03■□□□□ 0.64
Ldb1P70662 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.03■□□□□ 0.64
Ldb1P70662 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ldb1P70662 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.03■□□□□ 0.64
Ldb1P70662 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ldb1P70662 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb1P70662 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ldb1P70662 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Ldb1P70662 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb1P70662 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb1P70662 Gm26833-201ENSMUST00000180899 440 ntBASIC19.02■□□□□ 0.64
Ldb1P70662 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb1P70662 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.02■□□□□ 0.64
Ldb1P70662 Golph3-205ENSMUST00000228671 2842 ntBASIC19.02■□□□□ 0.64
Ldb1P70662 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ldb1P70662 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ldb1P70662 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.01■□□□□ 0.63
Ldb1P70662 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.01■□□□□ 0.63
Ldb1P70662 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.01■□□□□ 0.63
Ldb1P70662 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ldb1P70662 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Ldb1P70662 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb1P70662 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19■□□□□ 0.63
Ldb1P70662 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19■□□□□ 0.63
Ldb1P70662 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ldb1P70662 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ldb1P70662 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ldb1P70662 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ldb1P70662 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19■□□□□ 0.63
Ldb1P70662 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19■□□□□ 0.63
Ldb1P70662 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ldb1P70662 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ldb1P70662 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb1P70662 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.98■□□□□ 0.63
Ldb1P70662 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ldb1P70662 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb1P70662 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.97■□□□□ 0.63
Ldb1P70662 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb1P70662 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb1P70662 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.97■□□□□ 0.63
Ldb1P70662 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb1P70662 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ldb1P70662 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ldb1P70662 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ldb1P70662 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb1P70662 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb1P70662 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.96■□□□□ 0.63
Ldb1P70662 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ldb1P70662 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.96■□□□□ 0.63
Ldb1P70662 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.96■□□□□ 0.63
Ldb1P70662 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ldb1P70662 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ldb1P70662 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms