Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cux2P70298 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cux2P70298 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC31.91■■■□□ 2.7
Cux2P70298 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC31.91■■■□□ 2.7
Cux2P70298 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cux2P70298 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cux2P70298 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cux2P70298 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cux2P70298 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC31.89■■■□□ 2.7
Cux2P70298 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC31.89■■■□□ 2.7
Cux2P70298 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC31.89■■■□□ 2.7
Cux2P70298 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
Cux2P70298 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Cux2P70298 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
Cux2P70298 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Cux2P70298 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Cux2P70298 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Cux2P70298 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Cux2P70298 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC31.87■■■□□ 2.69
Cux2P70298 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cux2P70298 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC31.87■■■□□ 2.69
Cux2P70298 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC31.87■■■□□ 2.69
Cux2P70298 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Cux2P70298 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Gm15847-201ENSMUST00000121417 1065 ntBASIC31.86■■■□□ 2.69
Cux2P70298 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Cux2P70298 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cux2P70298 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC31.85■■■□□ 2.69
Cux2P70298 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cux2P70298 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Cux2P70298 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cux2P70298 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cux2P70298 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Cux2P70298 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cux2P70298 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cux2P70298 Gm43672-201ENSMUST00000199072 1731 ntBASIC31.84■■■□□ 2.69
Cux2P70298 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Cux2P70298 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC31.83■■■□□ 2.69
Cux2P70298 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
Cux2P70298 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cux2P70298 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cux2P70298 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cux2P70298 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cux2P70298 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cux2P70298 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cux2P70298 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC31.81■■■□□ 2.68
Cux2P70298 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Cux2P70298 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Cux2P70298 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Cux2P70298 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cux2P70298 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Cux2P70298 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Cux2P70298 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cux2P70298 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cux2P70298 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Cux2P70298 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cux2P70298 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Cux2P70298 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cux2P70298 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC31.78■■■□□ 2.68
Cux2P70298 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cux2P70298 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Cux2P70298 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cux2P70298 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
Cux2P70298 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC31.78■■■□□ 2.68
Cux2P70298 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Cux2P70298 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cux2P70298 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cux2P70298 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cux2P70298 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC31.77■■■□□ 2.68
Cux2P70298 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Cux2P70298 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cux2P70298 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Cux2P70298 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cux2P70298 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cux2P70298 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Cux2P70298 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Cux2P70298 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cux2P70298 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cux2P70298 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC31.75■■■□□ 2.67
Cux2P70298 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cux2P70298 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms