Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC26.32■■□□□ 1.8
Stra8P70278 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
Stra8P70278 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Stra8P70278 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Stra8P70278 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stra8P70278 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stra8P70278 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stra8P70278 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stra8P70278 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Stra8P70278 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Stra8P70278 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC26.3■■□□□ 1.8
Stra8P70278 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC26.3■■□□□ 1.8
Stra8P70278 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Stra8P70278 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.3■■□□□ 1.8
Stra8P70278 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Stra8P70278 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Stra8P70278 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.29■■□□□ 1.8
Stra8P70278 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Stra8P70278 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC26.29■■□□□ 1.8
Stra8P70278 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Stra8P70278 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Stra8P70278 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stra8P70278 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Stra8P70278 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Stra8P70278 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Stra8P70278 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Stra8P70278 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Stra8P70278 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Stra8P70278 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Stra8P70278 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Stra8P70278 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stra8P70278 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stra8P70278 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Stra8P70278 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.26■■□□□ 1.79
Stra8P70278 Gm43759-201ENSMUST00000196925 1261 ntBASIC26.26■■□□□ 1.79
Stra8P70278 AC124603.1-201ENSMUST00000223843 308 ntBASIC26.26■■□□□ 1.79
Stra8P70278 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Stra8P70278 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Stra8P70278 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Gm20100-201ENSMUST00000209418 2272 ntBASIC26.24■■□□□ 1.79
Stra8P70278 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Stra8P70278 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Stra8P70278 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Stra8P70278 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Stra8P70278 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Stra8P70278 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Stra8P70278 AA386476-201ENSMUST00000098781 1665 ntBASIC26.22■■□□□ 1.79
Stra8P70278 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Stra8P70278 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC26.22■■□□□ 1.79
Stra8P70278 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Stra8P70278 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC26.22■■□□□ 1.79
Stra8P70278 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Stra8P70278 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Stra8P70278 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Stra8P70278 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Stra8P70278 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Stra8P70278 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Stra8P70278 Gm6627-201ENSMUST00000218299 2386 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms