Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.88■□□□□ 0.45
Six5P70178 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six5P70178 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six5P70178 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.87■□□□□ 0.45
Six5P70178 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six5P70178 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six5P70178 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.86■□□□□ 0.45
Six5P70178 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Six5P70178 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Six5P70178 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Six5P70178 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Six5P70178 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six5P70178 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Six5P70178 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six5P70178 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six5P70178 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six5P70178 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Six5P70178 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Six5P70178 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six5P70178 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
Six5P70178 Golph3-202ENSMUST00000226517 2359 ntBASIC17.85■□□□□ 0.45
Six5P70178 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Six5P70178 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.85■□□□□ 0.45
Six5P70178 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six5P70178 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Six5P70178 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Six5P70178 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six5P70178 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
Six5P70178 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six5P70178 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six5P70178 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.84■□□□□ 0.45
Six5P70178 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.84■□□□□ 0.45
Six5P70178 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six5P70178 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six5P70178 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Six5P70178 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Six5P70178 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six5P70178 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.83■□□□□ 0.44
Six5P70178 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Six5P70178 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.83■□□□□ 0.44
Six5P70178 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six5P70178 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.82■□□□□ 0.44
Six5P70178 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
Six5P70178 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six5P70178 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.81■□□□□ 0.44
Six5P70178 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.81■□□□□ 0.44
Six5P70178 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Six5P70178 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Six5P70178 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six5P70178 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six5P70178 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six5P70178 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Six5P70178 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six5P70178 Gm7860-201ENSMUST00000121190 879 ntBASIC17.8■□□□□ 0.44
Six5P70178 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six5P70178 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Six5P70178 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six5P70178 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms