Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Crnkl1P63154 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Crnkl1P63154 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Crnkl1P63154 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Crnkl1P63154 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.85■□□□□ 0.61
Crnkl1P63154 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Crnkl1P63154 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Crnkl1P63154 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Crnkl1P63154 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Crnkl1P63154 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Crnkl1P63154 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Crnkl1P63154 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Crnkl1P63154 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.84■□□□□ 0.61
Crnkl1P63154 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Crnkl1P63154 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crnkl1P63154 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.83■□□□□ 0.61
Crnkl1P63154 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crnkl1P63154 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crnkl1P63154 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Crnkl1P63154 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.83■□□□□ 0.6
Crnkl1P63154 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Crnkl1P63154 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Crnkl1P63154 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crnkl1P63154 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.82■□□□□ 0.6
Crnkl1P63154 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
Crnkl1P63154 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.82■□□□□ 0.6
Crnkl1P63154 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
Crnkl1P63154 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crnkl1P63154 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Crnkl1P63154 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Crnkl1P63154 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Crnkl1P63154 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.81■□□□□ 0.6
Crnkl1P63154 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crnkl1P63154 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Crnkl1P63154 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Crnkl1P63154 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.8■□□□□ 0.6
Crnkl1P63154 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Crnkl1P63154 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Crnkl1P63154 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crnkl1P63154 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Crnkl1P63154 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.79■□□□□ 0.6
Crnkl1P63154 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms