Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a1P61620 Gm43137-201ENSMUST00000198052 594 ntBASIC16.75■□□□□ 0.27
Sec61a1P61620 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a1P61620 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Sec61a1P61620 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sec61a1P61620 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sec61a1P61620 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.74■□□□□ 0.27
Sec61a1P61620 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sec61a1P61620 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sec61a1P61620 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.73■□□□□ 0.27
Sec61a1P61620 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sec61a1P61620 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Gm43530-201ENSMUST00000195920 274 ntBASIC16.73■□□□□ 0.27
Sec61a1P61620 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Sec61a1P61620 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.73■□□□□ 0.27
Sec61a1P61620 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sec61a1P61620 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.72■□□□□ 0.27
Sec61a1P61620 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sec61a1P61620 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.71■□□□□ 0.27
Sec61a1P61620 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sec61a1P61620 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sec61a1P61620 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sec61a1P61620 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sec61a1P61620 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sec61a1P61620 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a1P61620 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sec61a1P61620 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sec61a1P61620 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Sec61a1P61620 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.69■□□□□ 0.26
Sec61a1P61620 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms