Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm6139-201ENSMUST00000079261 882 ntBASIC19.49■□□□□ 0.71
Tubgcp3P58854 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubgcp3P58854 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubgcp3P58854 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubgcp3P58854 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubgcp3P58854 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubgcp3P58854 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Tubgcp3P58854 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Gm11421-201ENSMUST00000122124 294 ntBASIC19.46■□□□□ 0.71
Tubgcp3P58854 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubgcp3P58854 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.45■□□□□ 0.7
Tubgcp3P58854 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.45■□□□□ 0.7
Tubgcp3P58854 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubgcp3P58854 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tubgcp3P58854 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tubgcp3P58854 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.43■□□□□ 0.7
Tubgcp3P58854 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.42■□□□□ 0.7
Tubgcp3P58854 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubgcp3P58854 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Tubgcp3P58854 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubgcp3P58854 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tubgcp3P58854 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubgcp3P58854 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms