Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nub1P54729 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nub1P54729 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.54■□□□□ 0.88
Nub1P54729 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.54■□□□□ 0.88
Nub1P54729 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nub1P54729 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.54■□□□□ 0.88
Nub1P54729 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.54■□□□□ 0.88
Nub1P54729 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nub1P54729 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.54■□□□□ 0.88
Nub1P54729 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nub1P54729 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nub1P54729 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.52■□□□□ 0.88
Nub1P54729 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.52■□□□□ 0.88
Nub1P54729 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nub1P54729 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.52■□□□□ 0.88
Nub1P54729 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nub1P54729 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nub1P54729 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nub1P54729 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Nub1P54729 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nub1P54729 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nub1P54729 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nub1P54729 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nub1P54729 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nub1P54729 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Nub1P54729 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nub1P54729 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nub1P54729 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.5■□□□□ 0.87
Nub1P54729 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nub1P54729 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nub1P54729 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nub1P54729 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Nub1P54729 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Nub1P54729 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nub1P54729 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.49■□□□□ 0.87
Nub1P54729 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.49■□□□□ 0.87
Nub1P54729 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.49■□□□□ 0.87
Nub1P54729 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.49■□□□□ 0.87
Nub1P54729 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.49■□□□□ 0.87
Nub1P54729 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nub1P54729 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nub1P54729 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nub1P54729 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
Nub1P54729 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.48■□□□□ 0.87
Nub1P54729 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.48■□□□□ 0.87
Nub1P54729 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Nub1P54729 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nub1P54729 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nub1P54729 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.47■□□□□ 0.87
Nub1P54729 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nub1P54729 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nub1P54729 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nub1P54729 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.46■□□□□ 0.87
Nub1P54729 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.46■□□□□ 0.87
Nub1P54729 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.46■□□□□ 0.87
Nub1P54729 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nub1P54729 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nub1P54729 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms