Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga2P52927 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmga2P52927 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hmga2P52927 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmga2P52927 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hmga2P52927 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hmga2P52927 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga2P52927 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hmga2P52927 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.27■□□□□ 0.2
Hmga2P52927 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
Hmga2P52927 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hmga2P52927 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hmga2P52927 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hmga2P52927 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hmga2P52927 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.27■□□□□ 0.19
Hmga2P52927 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.26■□□□□ 0.19
Hmga2P52927 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.26■□□□□ 0.19
Hmga2P52927 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hmga2P52927 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmga2P52927 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hmga2P52927 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hmga2P52927 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.25■□□□□ 0.19
Hmga2P52927 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmga2P52927 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmga2P52927 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmga2P52927 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.25■□□□□ 0.19
Hmga2P52927 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hmga2P52927 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hmga2P52927 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.25■□□□□ 0.19
Hmga2P52927 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmga2P52927 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hmga2P52927 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmga2P52927 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Serp2-204ENSMUST00000228055 705 ntBASIC16.24■□□□□ 0.19
Hmga2P52927 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.24■□□□□ 0.19
Hmga2P52927 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga2P52927 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmga2P52927 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmga2P52927 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hmga2P52927 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.23■□□□□ 0.19
Hmga2P52927 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Hmga2P52927 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hmga2P52927 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmga2P52927 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga2P52927 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmga2P52927 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.22■□□□□ 0.19
Hmga2P52927 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmga2P52927 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga2P52927 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hmga2P52927 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Hmga2P52927 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Hmga2P52927 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmga2P52927 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga2P52927 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga2P52927 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga2P52927 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga2P52927 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms