Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atoh1P48985 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atoh1P48985 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atoh1P48985 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atoh1P48985 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Atoh1P48985 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atoh1P48985 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Atoh1P48985 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atoh1P48985 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.8■■□□□ 1.08
Atoh1P48985 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Atoh1P48985 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atoh1P48985 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atoh1P48985 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.79■■□□□ 1.08
Atoh1P48985 Gm44549-201ENSMUST00000208351 577 ntBASIC21.79■■□□□ 1.08
Atoh1P48985 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Atoh1P48985 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atoh1P48985 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atoh1P48985 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atoh1P48985 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Atoh1P48985 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atoh1P48985 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.78■■□□□ 1.08
Atoh1P48985 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atoh1P48985 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atoh1P48985 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atoh1P48985 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atoh1P48985 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atoh1P48985 Gm37055-201ENSMUST00000191866 133 ntBASIC21.77■■□□□ 1.08
Atoh1P48985 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atoh1P48985 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.77■■□□□ 1.08
Atoh1P48985 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Atoh1P48985 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atoh1P48985 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Atoh1P48985 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Atoh1P48985 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atoh1P48985 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Atoh1P48985 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Atoh1P48985 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Atoh1P48985 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Atoh1P48985 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Atoh1P48985 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.75■■□□□ 1.07
Atoh1P48985 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.75■■□□□ 1.07
Atoh1P48985 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Atoh1P48985 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.75■■□□□ 1.07
Atoh1P48985 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atoh1P48985 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Atoh1P48985 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 Gm15378-201ENSMUST00000121894 207 ntBASIC21.74■■□□□ 1.07
Atoh1P48985 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.74■■□□□ 1.07
Atoh1P48985 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.74■■□□□ 1.07
Atoh1P48985 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.74■■□□□ 1.07
Atoh1P48985 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.74■■□□□ 1.07
Atoh1P48985 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atoh1P48985 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.73■■□□□ 1.07
Atoh1P48985 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Gm2399-201ENSMUST00000104944 225 ntBASIC21.73■■□□□ 1.07
Atoh1P48985 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.73■■□□□ 1.07
Atoh1P48985 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atoh1P48985 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Atoh1P48985 Mir1199-201ENSMUST00000117015 119 ntBASIC21.72■■□□□ 1.07
Atoh1P48985 Gm11643-201ENSMUST00000119578 864 ntBASIC21.72■■□□□ 1.07
Atoh1P48985 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.72■■□□□ 1.07
Atoh1P48985 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atoh1P48985 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atoh1P48985 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atoh1P48985 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atoh1P48985 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms